Automatic generation of 3D structures and conformers of molecules in Marvin - Clean/3D
Key topics:
- The method in a nutshell
- Using Clean/3D menu from the MSketch/MView GUI
- Batch processing via MolConvert
- Runtime parameters, special tricks
- Examples
Additional resources
ChemAxon MarvinSketch and MarvinView implementation of Clean/3D: /marvin/doc/dev/index.html#examples